By John M. Hancock
ISBN-10: 0470978716
ISBN-13: 9780470978719
Concise Encyclopaedia of Bioinformatics and Computational Biology, second Edition is a completely revised and up to date model of this acclaimed source. The booklet offers definitions and sometimes motives of over a thousand phrases, words and ideas on the subject of this fast-moving and fascinating box, supplying a handy, one-stop precis of the middle wisdom within the zone. This moment variation is a useful source for college kids, researchers and academics.
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A 32 ASSOCIATIVE ARRAY, SEE DATA STRUCTURE. Tan P-N, Kumar V, Srivastava J (2004) Selecting the right objective measure for association analysis. Information Systems 29(4): 293–313. A Wu X, Jiang R, Zhang MQ, Li S (2008) Network-based global inference of human disease genes. Molecular Systems Biology 4: 189. ASSOCIATIVE ARRAY, SEE DATA STRUCTURE. ASYMMETRIC UNIT Liz Carpenter The asymmetric unit of a crystal is the smallest building block from which a crystal can be created by applying the crystallographic symmetry operators followed by translation by multiples of the unit cell vectors.
AMINO ACID COMPOSITION Jeremy Baum The relative abundance of the twenty amino acids (usually) in a protein. This measure can be used to make predictions of the protein class, as for example integral membrane proteins tend to have more hydrophobic residues than do cytoplasmic proteins. See also Amino Acid AMINO ACID EXCHANGE MATRIX (DAYHOFF MATRIX, LOG ODDS SCORE, PAM (MATRIX), BLOSUM MATRIX) Jaap Heringa An amino acid exchange matrix is a 20×20 matrix which contains probabilities for each possible mutation between 20 amino acids.
Further reading Dayhoff MO, Barker WC, Hunt LT (1983) Establishing homologies in protein sequences. Methods Enzymol 91: 524–545. Dayhoff MO, Schwartz RM, Orcutt BC (1978) A model of evolutionary change in proteins. 5, suppl. 3, Washington, DC, Natl. Biomed. Res. ), pp. 345–352. Doolittle RF (1987) Of URFS and ORFS. A Primer on How to Analyze Derived Amino Acid Sequences. University Science Books, Mill Valley, CA. Eisenberg D, L¨uthy R, McLachlan AD (1991) Secondary structure-based profiles: Use of structureconserving scoring tables in searching protein sequence databases for structural similaritiesimilarities.
Concise Encyclopaedia of Bioinformatics and Computational Biology by John M. Hancock
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